Harrick Plasma : References : Articles, Patents and Dissertations

Category: Biology

This category encompasses a wide range of subjects in the biological field. The following papers discuss work related to biological subsystems for life processes, such as the functionality of bacteria, DNA/RNA, enzymes and proteins.

Articles

Biais, N., D. Higashi, M. So, B. Ladoux. "Techniques to Measure Pilus Retraction Forces." Methods in Molecular Biology (2012) 799: 197-216.
Calchera, A.R., A.D. Curtis, J.E. Patterson. "Plasma Treatment of Polystyrene Thin Films Affects More than the Surface." ACS Applied Materials & Interfaces (2012) 4(7): 3493–3499.
Capule, C.C., J. Yang. "Enzyme-Linked Immunosorbent Assay-Based Method to Quantify the Association of Small Molecules with Aggregated Amyloid Peptides." Analytical Chemistry (2012) 84 (3): 1786-1791.
Chrzanowski, W., J. Szade, A.D. Hart, J.C. Knowles, M.J. Dalby. "Biocompatible, smooth, plasma-treated nickel-titanium surface-an adequate platform for cell growth." Journal of Biomaterials Applications (2012) 26 (6): 707 - 731.
Correia-Ledo, D., K.F. Gibson, A. Dhawan, M. Couture, T. Vo-Dinh, D. Graham, J.-F. Masson. "Assessing the Location of Surface Plasmons Over Nanotriangle and Nanohole Arrays of Different Size and Periodicity." The Journal of Physical Chemistry C (2012) 116 (12): 6884-6892.
Doug, A., A.P. Borole, S. Yiacoumi, C. Tsouris. "Effects of operating conditions on internal resistances in enzyme fuel cells studied via electrochemical impedance spectroscopy." Journal of Power Sources (2012) 201 (0): 59 - 65.
Ducret, A., M.P. Valignat, F. Mouhamar, T. Mignot, O. Theodoly. "Wet-surface-enhanced ellipsometric contrast microscopy identifies slime as a major adhesion factor during bacterial surface motility." Proceedings of the National Academy of Sciences (2012) 109 (25): 10036-10041.
Gallier, S., D. Gragson, R. Jimenez-Flores, D.W. Everett. "beta-Casein-phospholipid monolayers as model systems to understand lipid-protein interactions in the milk fat globule membrane." International Dairy Journal (2012) 22 (1): 58-65.
Gaspar, A., F.A. Gomez. "Development of an ultra-low volume flow cell for surface plasmon resonance detection in a miniaturized capillary electrophoresis system." Electrophoresis (2012) 33 (12): 1723-1728.
Gopalakrishnan, G., P.T. Yam, C. Madwar, M. Bostina, I. Rouiller, D.R. Colman, R.B. Lennox. "Label-Free Visualization of Ultrastructural Features of Artificial Synapses via Cryo-EM." ACS Chemical Neuroscience (2012) 2 (12): 700-704.
Hira, S.M., K. Aledealat, K.-S. Chen, M. Field, G.J. Sullivan, P.B. Chase, P. Xiong, S. von Molnar, G. F. Strouse . "Detection of Target ssDNA Using a Microfabricated Hall Magnetometer with Correlated Optical Readout." Journal of Biomedicine and Biotechnology (2012) 2012: 492730 (10 pages).
Holland, J.G., F.M. Geiger. "Importance of Length and Sequence Order on Magnesium Binding to Surface-Bound Oligonucleotides Studied by Second Harmonic Generation and Atomic Force Microscopy." The Journal of Physical Chemistry B (2012) 116 (22): 6302-6310.
Huang, B.-R., T.-C. Lin, J. P. Chu, Y.-C. Chen. "Long-term stability of a horizontally-aligned carbon nanotube field emission cathode coated with a metallic glass thin film." Carbon (2012) 50: 1619 - 1624.
Jing, X., M.R. Kasimova, A.H. Simonsen, L. Jorgensen, M. Malmsten, H. Franzyk, C. Foged, H.M. Nielsen. "Interaction of Peptidomimetics with Bilayer Membranes: Biophysical Characterization and Cellular Uptake." Langmuir (2012) 28 (11): 5167-5175.
Lai, N., J.K. Sims, N.L. Jeon, K. Lee. "Adipocyte Induction of Preadipocyte Differentiation in a Gradient Chamber." Tissue Engineering (2012) : .
Lu, X., J. S. Kim-Han, K. L. O'Malley, S. E. Sakiyama-Elbert. "A microdevice platform for visualizing mitochondrial transport in aligned dopaminergic axons." Journal of Neuroscience Methods (2012) 207 (1-3): 35-39.
Meunier , A., R. Fulcrand , F. Darchen , M.G. Collignon , F. Lemaître , C. Amatore. "Indium Tin Oxide devices for amperometric detection of vesicular release by single cells." Biophysical Chemistry (2012) 162: 14-21.
Park, H.J., T.-W. Koh, Y. Do, M.H. Lee, S. Yoo. "Soluble polynorbornenes with pendant carbazole derivatives as host materials for highly efficient blue phosphorescent organic light-emitting diodes." Journal of Polymer Science Part A: Polymer Chemistry (2012) 50 (12): 2356-2365.
Tong, , Z., E.M. Balzer, M.R. Dallas, W.-C. Hung, K.J. Stebe, K. Konstantopoulos. "Chemotaxis of Cell Populations through Confined Spaces at Single-Cell Resolution." PLoS ONE (2012) 7 (1): e29211.
Wang, X., S.-i. Takebayashi, E. Bernardin, D. M. Gilbert, R. Chella, J. Guan. "Microfluidic extraction and stretching of chromosomal DNA from single cell nuclei for DNA fluorescence in situ hybridization." Biomedical Microdevices (2012) 14 (3): 443-451.
Wang, Y., P. Shah, C. Phillips, C. Sims, N. Allbritton. "Trapping cells on a stretchable microwell array for single-cell analysis." Analytical and Bioanalytical Chemistry (2012) 402 (3): 1065-1072.
Zhu, X., G. Wu, R. Dong, C.M. Chen, S. Yang. "Capillarity induced instability in responsive hydrogel membranes with periodic hole array." Soft Matter (2012) 8: 8088-8093.
An, B., Lee, S., E. Lee, J. Lee, S. Wi, H. Jung, W. Park, S. Lee, B. Chung. "Functional switching of a novel prokaryotic 2-Cys peroxiredoxin (PpPrx) under oxidative stress." Cell Stress and Chaperones (2011) 16 (3): 317-328.
Burman, R., A.A. Stromstedt, M. Malmsten, U. Goransson. "Cyclotide-membrane interactions: Defining factors of membrane binding, depletion and disruption." Biochimica et Biophysica Acta (BBA) - Biomembranes (2011) 1808 (11): 2665-2673.
Caicedo-Carvajal, C. E., Q. Liu, Y. Remache, A. Goy, K. S. Suh. "Cancer Tissue Engineering: A Novel 3D Polystyrene Scaffold for In Vitro Isolation and Amplification of Lymphoma Cancer Cells from Heterogeneous Cell Mixtures." Journal of Tissue Engineering (2011) 2(1): 2011_362326.
Chen, F., Y. Zhan, T. Geng, H. Lian, P. Xu, C. Lu. "Chemical Transfection of Cells in Picoliter Aqueous Droplets in Fluorocarbon Oil." Analytical Chemistry (2011) 83 (22): 8816-8820.
Chou, Y.-F., P.A. Zuk, T.-L. Chang, P. Benhaim, B.M. Wu. "Adipose-derived stem cells and BMP2: Part 1. BMP2-treated adipose-derived stem cells do not improve repair of segmental femoral defects." Connective Tissue Research (2011) 52 (2): 109-118.
Cranston, E.D., M. Eita, E. Johansson, J. Netrval, M. Salajkova, H. Arwin, L. Wagberg. "Determination of Young's Modulus for Nanofibrillated Cellulose Multilayer Thin Films Using Buckling Mechanics." Biomacromolecules (2011) 12 (4): 961-969.
Dukes, M.J., R. Ramachandra, J.-P. Baudoin, W.G. Jerome, N. de Jonge. "Three-dimensional locations of gold-labeled proteins in a whole mount eukaryotic cell obtained with 3 nm precision using aberration-corrected scanning transmission electron microscopy." Journal of Structural Biology (2011) 174 (3): 552 - 562.
Ehrlich, N., A.L. Christensen, D. Stamou. "Fluorescence Anisotropy Based Single Liposome Assay to Measure Molecule-Membrane Interactions." Analytical Chemistry (2011) 83 (21): 8169–8176.
Fukuda, J., K. Nakazawa. "Hepatocyte spheroid arrays inside microwells connected with microchannels." Biomicrofluidics (2011) 5 (2): 022205 (10 pp.).
Ghosh, S.K., S. Aeffner,T. Salditt. "Effect of PIP2 on Bilayer Structure and Phase Behavior of DOPC: An X-ray Scattering Study." Chem. Phys. Chem. (2011) 12 (14): 2633-2640.
Han, S.I., S.M. Lee, Y.D. Joo, K.H. Han. "Lateral dielectrophoretic microseparators to measure the size distribution of blood cells." Lab Chip (2011) 11 (22): 3864-3872.
Hawkins, B.G., C. Huang, S. Arasanipalai, B.J. Kirby. "Automated Dielectrophoretic Characterization of Mycobacterium smegmatis." Analytical Chemistry (2011) 83 (9): 3507-3515.
Huang, T., T.R. Shaikh, K. Gupta, L.M. Contreras-Martin, R.A. Grassucci, G.D. Van Duyne, J. Frank, M. Belfort. "The group II intron ribonucleoprotein precursor is a large, loosely packed structure." Nucleic Acids Research (2011) 39 (7): 2845-2854.
Keller, T.F., J. Schonfelder, J. Reichert, N. Tuccitto, A. Licciardello, G.M.L. Messina, G. Marletta, K.D. Jandt. "How the Surface Nanostructure of Polyethylene Affects Protein Assembly and Orientation." ACS Nano (2011) 5 (4): 3120-3131.
Kurth, I., K. Franke,T. Pompe, M. Bornhauser, C. Werner. "Extracellular Matrix Functionalized Microcavities to Control Hematopoietic Stem and Progenitor Cell Fate." Macromolecular Bioscience (2011) 11 (6): 739-747.
Lee, C.Y., M. Herant, V. Heinrich. "Target-specific mechanics of phagocytosis: protrusive neutrophil response to zymosan differs from the uptake of antibody-tagged pathogens." Journal of Cell Science (2011) 124 (7): 1106-1114.
Leonard, K.M., A.R. Minerick. "Explorations of ABO-Rh antigen expressions on erythrocyte dielectrophoresis: Changes in cross-over frequency." Electrophoresis (2011) 32 (18): 2512-2522.
Matsuura, K., Y. Kuroda, K. Yamashita, H. Funahashi. "Hydrophobic Silicone Elastomer Chamber for Recording Trajectories of Motile Porcine Sperms without Adsorption." Journal of Reproduction and Development (2011) 57 (1): 163-167.
Minc, N., D. Burgess, F. Chang. "Influence of Cell Geometry on Division-Plane Positioning." Cell (2011) 144 (3): 414-426.
Morris, L.K., E.A. Abu, C. Bowman, C.E. Estridge, S.E. Andria, C.J. Seliskar, W.R. Heineman. "Effect of the Concentration of Supporting Electrolyte on Spectroelectrochemical Detection of [Ru(bpy)3]2+." Electroanalysis (2011) 23 (4): 939-946.
Park, J.Y., H.O. Kim, K.D. Kim, S.K. Kim, S.K. Lee, H. Jung. "Monitoring the status of T-cell activation in a microfluidic system." Analyst (2011) 136 (13): 2831--2836.
Rosenberg, K.J.,T. Goren, R. Crockett, N.D. Spencer. "Load-Induced Transitions in the Lubricity of Adsorbed Poly(l-lysine)-g-dextran as a Function of Polysaccharide Chain Density." ACS Applied Materials & Interfaces (2011) 3 (8): 3020-3025.
Sambanthamoorthy, K., A. A.Gokhale, W. Lao, V. Parashar, M. B. Neiditch, M. F. Semmelhack, I. Lee, C. M. Waters. "Identification of a Novel Benzimidazole That Inhibits Bacterial Biofilm Formation in a Broad-Spectrum Manner." Antimicrobial agents and chemotherapy (2011) 55 (49): 4369--4378.
Shah, A., S. Shah, S. Oh, J. Ong, J. Wenke, C. Agrawal. "Migration of Co-cultured Endothelial Cells and Osteoblasts in Composite Hydroxyapatite/Polylactic Acid Scaffolds." Annals of Biomedical Engineering (2011) 39: 2501-2509.
Shi, X., L.-I. Lin, S.-Y. Chen, S.-H. Chao, W. Zhang, D. R. Meldrum. "Real-time PCR of single bacterial cells on an array of adhering droplets." Lab on a Chip (2011) 11 (13): 2276 - 81.
Sims, P.A., W.J. Greenleaf, H. Duan, X.S. Xie. "Fluorogenic DNA sequencing in PDMS microreactors." Nature Methods (2011) 8 (7): 575-580.
Srivastava, S.K., A. Artemiou, A.R. Minerick. "Direct current insulator-based dielectrophoretic characterization of erythrocytes: ABO-Rh human blood typing." Electrophoresis (2011) 32 (18): 2530-2540.
Staykova, M., D.P.Holmes, C. Read, H.A. Stone. "Mechanics of surface area regulation in cells examined with confined lipid membranes." Proceedings of the National Academy of Sciences (2011) 108 (22): 9084.
Sun, T., P.S. Donoghue, J.R. Higginson, N. Gadegaard, S.C. Barnett, M.O. Riehle. "A miniaturized bioreactor system for the evaluation of cell interaction with designed substrates in perfusion culture." Journal of Tissue Engineering and Regenerative Medicine (2011) : .
van Lengerich, B., R.J. Rawle, S.G. Boxer. "Covalent Attachment of Lipid Vesicles to a Fluid-Supported Bilayer Allows Observation of DNA-Mediated Vesicle Interactions." Langmuir (2011) 26 (11): 8666-8672.
Wang, L., Y. Fu, L. Zhu, G. Cui, F. Liang, L. Guo, X. Zhang, Z. Xie, Z. Su. "Synthesis and photovoltaic properties of low-bandgap polymers based on N-arylcarbazole." Polymer (2011) 52 (8): 1748-1754.
Worfolk, B.J., D.A. Rider, A.L. Elias, M. Thomas, K.D. Harris, J.M. Buriak. "Bulk Heterojunction Organic Photovoltaics Based on Carboxylated Polythiophenes and PCBM on Glass and Plastic Substrates." Advanced Functional Materials (2011) 21 (10): 1816--1826.
Zhang, J., A. A. Boghossian, P. W. Barone, A. Rwei, J.-H. Kim, D. Lin, D. A. Heller, A. J. Hilmer, N. Nair, N. F. Reuel, M.S.Strano. "Single Molecule Detection of Nitric Oxide Enabled by d(AT)₁₅ DNA Adsorbed to Near Infrared Fluorescent Single-Walled Carbon Nanotubes." Journal of the American Chemical Society (2011) 133 (3): 567-581.
Zimmermann, R., D. Kuttner, L. Renner, M. Kaufmann, C. Werner. "Fluidity Modulation of Phospholipid Bilayers by Electrolyte Ions: Insights from Fluorescence Microscopy and Microslit Electrokinetic Experiments." The Journal of Physical Chemistry B (2011) 116(25): 6519–6525.
An, B.C., S.S. Lee, E.M. Lee, J.T. Lee, S.G. Wi, H.S. Jung, W. Park, B.Y. Chung. "New antioxidant with dual functions as a peroxidase and chaperone in Pseudomonas aeruginosa." Molecules and Cells (2010) 29 (2): 145-151.
Badali, D., B. Liu, A. Mazouchi, M. Avadisian, P.T. Gunning, C.C. Gradinaru . "Development of STAT3 as an accessible target for fluorescence-based inhibition assays." University of Toronto Journal of Undergraduate Life Sciences (2010) 4 (1): .
Balz, T., A. D. deLima, T. Voigt. "Contribution of GABAergic interneurons to the development of spontaneous activity patterns in cultured neocortical networks." Frontiers in cellular neuroscience (2010) 4: 15.
Bhargava, N., M. Das, D. Edwards, M. Stancescu, J.-F. Kang, J. Hickman. "Coexpression of glutamate vesicular transporter (VGLUT1) and choline acetyltransferase (ChAT) proteins in fetal rat hippocampal neurons in culture." In Vitro Cellular & Developmental Biology - Animal (2010) 46: 685-692.
Chang, R., K. Emami, H. Wu, W. Sun. "Biofabrication of a three-dimensional liver micro-organ as an in vitro drug metabolism model." Biofabrication (2010) 2 (4): 045004 (11 pp.).
Chang, S.-H., J.-L. Han, S.Y. Tseng, H.-Y. Lee, C.-W. Lin, Y.-C. Lin, W.-Y. Jeng, A. H.-J. Wang, C.-Y. Wu, C.-H. Wong. "Glycan Array on Aluminum Oxide-Coated Glass Slides through Phosphonate Chemistry." Journal of the American Chemical Society (2010) 132 (38): 13371-13380.
Cheng, C. M., Y. W. Lin, R. M. Bellin, R. L. Steward, Y. R. Cheng, P. R. LeDuc, C. C. Chen. "Probing localized neural mechanotransduction through surface-modified elastomeric matrices and electrophysiology." Nat. Protoc. (2010) 5: 714-724.
Choi, Y. S., H. B. Kim, J. Chung, H. S. Kim, J. H. Yi, J. K. Park. "Preclinical Analysis of Irreversible Electroporation on Rat Liver Tissues Using a Microfabricated Electroporator." Tissue Eng. Part C: Methods (2010) 16(6): 1245-1253.
Church, C., J. Zhu, G. Huang, T.R. Tzeng, X. Xuan. "Integrated electrical concentration and lysis of cells in a microfluidic chip." Biomicrofluidics (2010) 4 (4): 043007.
Dobro, M.J., L.A. Melanson, G.J. Jensen, A.W. McDowall. "Chapter Three - Plunge Freezing for Electron Cryomicroscopy." Methods in Enzymology (2010) 481: 63-82.
Du, X.-L., D.-M. Duan, R. Cao, G. Jin, J. Li. "Enhancing DNA Detection Sensitivity Through a Two-Step Enrichment Method with Magnetic Beads and Droplet Evaporation." Analytical Letters (2010) 43 (9): 1525-1533.
Eriksson, E., K. Sott, F. Lundqvist, M. Sveningsson, J. Scrimgeour, D. Hanstorp, M. Goksör, A. Granéli. "A microfluidic device for reversible environmental changes around single cells using optical tweezers for cell selection and positioning." Lab Chip (2010) 10: 617-625.
Flynn, B.P., A.P.Bhole, N. Saeidi, M. Liles, C.A. DiMarzio, J.W. Ruberti. "Mechanical strain stabilizes reconstituted collagen fibrils against enzymatic degradation by mammalian collagenase matrix metalloproteinase 8 (MMP-8)." PLoS ONE (2010) 5 (8): e 12337.
Greiner, A.J., R.J. Richardson, R.M. Worden, R.Y. Ofoli. "Influence of lysophospholipid hydrolysis by the catalytic domain of neuropathy target esterase on the fluidity of bilayer lipid membranes." Biochimica et Biophysica Acta (BBA) - Biomembranes (2010) 1798 (8): 1533-1539.
Horn, A., S. Hiltl, A. Fery, A. Boker. "Ordering and Printing Virus Arrays: A Straightforward Way to Functionalize Surfaces." Small (2010) 6 (19): 2122-2125.
Hubert, P.J., K. Kathiresan, K. Wakabayashi. "Polymer-graphite Nanocomposites Via Batch And Continuous Solid-state Pulverization Methods." 68th Annual Technical Conference of the Society of Plastics Engineers 2010, ANTEC 2010 (2010) 1: .
Karatekin, E., J. Di Giovanni, C. Iborra, J. Coleman, B. O'Shaughnessy, M. Seagar, J. E. Rothman, J. E.. "A fast, single-vesicle fusion assay mimics physiological SNARE requirements." Proc. Natl. Acad. Sci. U. S. A. (2010) 107(8): 3517-3521.
Kaur, H., R. Heeney, R. Carriveau, G. Sosne, B. Mutus. "Whole blood, flow-chamber studies in real-time indicate a biphasic role for thymosin beta-4 in platelet adhesion." Biochimica et Biophysica Acta (BBA) - General Subjects (2010) 1800 (12): 1256-1261.
Kiessling, V., M.K. Domanska, L.K. Tamm. "Single SNARE-Mediated Vesicle Fusion Observed In Vitro by Polarized TIRFM." Biophysical Journal (2010) 99 (12): 4047-4055.
Lee, S. H., A. J. Heinz, S. Shin, Y. G. Jung, S. E. Choi, W. Park, J. H. Roe, S. Kwon. "Capillary Based Patterning of Cellular Communities in Laterally Open Channels." Anal. Chem. (2010) 82(7): 2900-2906.
Love, K.R., V. Panagiotou, B. Jiang, T.A. Stadheim, J.C. Love. "Integrated single-cell analysis shows Pichia pastoris secretes protein stochastically." Biotechnology and Bioengineering (2010) 106 (2): 319-325.
Macdonald, M.L., N.M. Rodriguez, N.J. Shah, P.T. Hammond. "Characterization of Tunable FGF-2 Releasing Polyelectrolyte Multilayers." Biomacromolecules (2010) 11 (8): 2053-2059.
Mehrotra, S., S.C. Hunley, K.M. Pawelec, L. Zhang, I. Lee, S. Baek, C. Chan. "Cell Adhesive Behavior on Thin Polyelectrolyte Multilayers: Cells Attempt to Achieve Homeostasis of Its Adhesion Energy." Langmuir (2010) 26 (15): 12794-12802.
Miquelard-Garnier, G., J. A. Zimberlin, C. B. Sikora, P. Wadsworth, A. Crosby. "Polymer microlenses for quantifying cell sheet mechanics." Soft Matter (2010) 6(2): 398-403.
Moreno-Flores, S., R.Benitez, M. dM Vivanco, J.L. Toca-Herrera. "Stress relaxation and creep on living cells with the atomic force microscope: a means to calculate elastic moduli and viscosities of cell components." Nanotechnology (2010) 21 (44): 445101.
Park, M.H., C. Yun, J.O. Huh, Y. Do, S. Yoo, M.H. Lee. "Synthesis and hole-transporting properties of vinyl-type polynorbornenes with ethyl ester linked triarylamine side groups." Synthetic Metals (2010) 160 (17-18): 2000-2007.
Renner, L., T. Pompe, R. Lemaitre, D. Drechsel, C. Werner. "Controlled enhancement of transmembrane enzyme activity in polymer cushioned supported bilayer membranes." Soft Matter (2010) 6 (21): 5382 - 5389.
Reymann, A.-C., J.-L. Martiel,T. Cambier, L. Blanchoin, R. Boujemaa-Paterski, M. Thery. "Nucleation geometry governs ordered actin networks structures." Nature Materials (2010) 9 (10): 827-832.
Seggio, A. M., A. Narayanaswamy, B. Roysam, D. M. Thompson. "Self-aligned Schwann cell monolayers demonstrate an inherent ability to direct neurite outgrowth." J. Neur. Eng. (2010) 7: 046001.
Simonsson, L., P. Jönsson, G. Stengel, F. Höök. "Site-Specific DNA-Controlled Fusion of Single Lipid Vesicles to Supported Lipid Bilayers." Chem. Phys. Chem. (2010) 11(5): 1011-1017.
Strovas, T.J., S.C. McQuaide, J.B. Anderson, V. Nandakumar, M. G. Kalyuzhnaya, L.W. Burgess, M.R. Holl, D.R. Meldrum, M.E. Lidstrom . "Direct measurement of oxygen consumption rates from attached and unattached cells in a reversibly sealed, diffusionally isolated sample chamber." Advances in bioscience and biotechnology (2010) 5 (5): 398-408.
Szmodis, A.W., C.D. Blanchette, M.L. Longo, C.A. Orme, A.N. Parikh. "Thermally induced phase separation in supported bilayers of glycosphingolipid and phospholipid mixtures." Biointerphases (2010) 5 (4): 120-130.
Tian, Y., B. R. Shumway, W. Gao, C. Youngbull, M. R. Holl, R. H. Johnson, D. R. Meldrum. "Influence of matrices on oxygen sensing of three sensing films with chemically conjugated platinum porphyrin probes and preliminary application for monitoring of oxygen consumption of Escherichia coli (E. coli)." Sensors and Actuators B: Chemical (2010) 150 (2): 579 - 587.
Torres, A., C. Ruales, C. Pulgarin, A. Aimable, P. Bowen, V. Sarria, J. Kiwi. "Innovative High-Surface-Area CuO Pretreated Cotton Effective in Bacterial Inactivation under Visible Light." ACS Applied Materials & Interfaces (2010) 2 (9): 2547-2552.
Wang, Y., C. Phillips, W. Xu, J.H. Pai, R. Dhopeshwarkar, C.E. Sims, N. Allbritton. "Micromolded arrays for separation of adherent cells." Lab Chip (2010) 10 (21): 2917-2924.
Xu, W., C.E. Sims, N. L. Allbritton . "Microcup Arrays for the Efficient Isolation and Cloning of Cells." Analytical Chemistry (2010) 82 (8): 3161-3167.
Yang, Y., J. Chae. "Dual-Column Miniseparator to Separate Alpha-Fetoprotein From Fibrinogen and Immunoglobulin." Microelectromechanical Systems, Journal of (2010) 19 (5): 1041-1049.
Yildirim, E.D., R. Besunder, D. Pappas, F. Allen, S. Guceri, W. Sun. "Accelerated differentiation of osteoblast cells on polycaprolactone scaffolds driven by a combined effect of protein coating and plasma modification." Biofabrication (2010) 2 (1): 014109.
Yuk, J.S., C. McDonagh, B.D. MacCraith. "Demonstration of a surface plasmon-coupled emission (SPCE)-based immunoassay in the absence of a spacer layer." Analytical and Bioanalytical Chemistry (2010) 398 (5): 1947-1954.
Bendix, P. M., M. S. Pedersen, D. Stamou. "Quantification of nano-scale intermembrane contact areas by using fluorescence resonance energy transfer." Proc. Natl. Acad. Sci. U. S. A. (2009) 106(30): 12341-12346.
Beta, C.. "Spatiotemporal stimulation of single cells using flow photolysis." Methods in Molecular Biology (2009) 571: 321-332.
Chen, C. Y., T. Y. Tu, C. H. Chen, D. S. Jong, A. M. Wo. "Patch clamping on plane glass-fabrication of hourglass aperture and high-yield ion channel recording." Lab Chip (2009) 9(16): 2370-2380.
Ista, L. K., S. Mendez, S. S. Balamurugan, S. Balamurugan, V. G. R. Rao, G. P. Lopez. "Smart Surfaces for the Control of Bacterial Attachment and Biofilm Accumulation." Smart Coatings II (2009) 1002: 95-110.
Jen, C. P., T. W. Chen. "Selective trapping of live and dead mammalian cells using insulator-based dielectrophoresis within open-top microstructures." Biomed. Microdevices (2009) 11(3): 597-607.
Kubow, K. E., E. Klotzsch, M. L. Smith, D. Gourdon, W. C. Little, V. Vogel. "Crosslinking of cell-derived 3D scaffolds up-regulates the stretching and unfolding of new extracellular matrix assembled by reseeded cells." Integr. Biol. (2009) 1(11): 635-648.
Lee, J. H., H. S. Jung, A. Gunzl. "Transcriptionally active TFIIH of the early-diverged eukaryote Trypanosoma brucei harbors two novel core subunits but not a cyclin-activating kinase complex." Nucleic Acids Res. (2009) 37(11): 3811-3820.
Minc, N., A. Boudaoud, F. Chang. "Mechanical Forces of Fission Yeast Growth." Curr. Biol. (2009) 19(13): 1096-1101.
Nakazawa, K., Y. Izumi, R. Mori. "Morphological and functional studies of rat hepatocytes on a hydrophobic or hydrophilic polydimethylsiloxane surface." Acta Biomater. (2009) 5(2): 613-620.
Qiu, J., Y. Zhou, H. Chen, J. M. Lin. "Immunomagnetic separation and rapid detection of bacteria using bioluminescence and microfluidics." Talanta (2009) 79(3): 787-795.
Shukla, A., K. E. Fleming, H. F. Chuang, T. M. Chau, C. R. Loose, G. N. Stephanopoulos, P. T. Hammond. "Controlling the release of peptide antimicrobial agents from surfaces." Biomater. (2009) 31: 2348–2357.
Timp, W., U. Mirsaidov, P. Matsudaira, G. Timp. "Jamming prokaryotic cell-to-cell communications in a model biofilm." Lab Chip (2009) 9(7): 925-934.
Yu, Z., O. Graudejus, C. Tsay, S. P. Lacour, S. Wagner, B. Morrison III. "Monitoring hippocampus electrical activity in vitro on an elastically deformable microelectrode array." J. Neurotrauma (2009) 26(7): 1135-1145.
Anglin, T. C., J. C. Conboy. "Lateral Pressure Dependence of the Phospholipid Transmembrane Diffusion Rate in Planar-Supported Lipid Bilayers." Biophys. J. (2008) 95: 186-193.
Bettinger, C. J. and Zhang, Z. and Gerecht, S. and Borenstein, J. T. and Langer, R.. "Enhancement of In Vitro Capillary Tube Formation by Substrate Nanotopography." Adv. Mater. (2008) 20(1): 99-103.
Choi, C. L., S. A. Claridge, E. C. Garner, A. P. Alivisatos, R. D. Mullins. "Protein-nanocrystal conjugates support a single filament polymerization model in R1 plasmid segregation." J. Biol. Chem. (2008) 283(42): 28081-28086.
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Statz, A., J. Finlay, J. Dalsin, M. Callow, J. A. Callow, P. B. Messersmith. "Algal antifouling and fouling-release properties of metal surfaces coated with a polymer inspired by marine mussels." Biofouling (2006) 22(6): 391-399.
Vanzi, F., C. Broggio, L. Sacconi, F. S. Pavone. "Lac repressor hinge flexibility and DNA looping: single molecule kinetics by tethered particle motion." Nucleic Acids Res. (2006) 34(12): 3409-3420.
Wattendorf, U., M. C. Koch, E. Walter, J. Voeroes, M. Textor, H. P. Merkle. "Phagocytosis of poly(L-lysine)-graft-poly(ethylene glycol) coated microspheres by antigen presenting cells: Impact of grafting ratio and poly(ethylene glycol) chain length on cellular recognition." Biointerphases (2006) 1(4): 123-133.
Chaudhury, Manoj K., John A. Finlay, Jun Young Chung, Maureen E. Callow, James A. Callow. "The Influence of Elastic Modulus and Thickness on the Release of the Soft-Fouling Green Alga ulval linza from PDMS Model Networks." Biofouling (2005) 21: 41-48.
Chou, Yu-Fen, Weibiao Huang, James C.Y. Dunn, Timothy A. Miller, Benjamin M. Wu. "The Effect of Biomimetic Apatite Structure on Osteoblast Viability, Proliferation, and Gene Expression." Biomaterials (2005) 26(3): 285-295.
Das, M., N. Bhargava, C. Gregory, L. Riedel, P. Molnar, J. Hickman. "Adult rat spinal cord culture on an organosilane surface in a novel serum-free medium." In Vitro Cell Dev.-An. (2005) 41: 343-348.
Endress, E., S. Weigelt, G. Reents, T.M. Bayerl. "Derivation of a Closed Form Analytical Expression for Fluorescence Recovery After Photo Bleaching in the Case of Continuous Bleaching During Read Out." Eur. Phys. J. E (2005) 16: 81-87.
Koschwanez, John, Mark Holl, Robert Carlson, Michael McMurray, Daniel Gottschling, Deirdre Meldrum. "Automated Lifetime Analysis of a Single Yeast Cell." Proceedings of the 2005 IEEE (2005) International Conference on Automation Science and Engineering: 13-18.
Pautot, S., H. Lee, E. Y. Isacoff, J. T. Groves. "Neuronal synapse interaction reconstituted between live cells and supported lipid bilayers." Nat. Chem. Biol. (2005) 1(5): 283-289.
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Wältermann, Marc, Andreas Hinz, Horst Robenek, David Troyer, Rudolf Reichelt, Ursula Malkus, Hans-Joachim Galla, Rainer Kalscheuer, Tim Stöveken, Philipp von Landenberg, Alexander Steinbüchel. "Mechanism of Lipid-Body Formation in Prokaryotes How Bacteria Fatten Up." Mol. Microbiol. (2005) 55: 750-763.
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Harris, L.G., S. Tosatti, M. Wieland, M. Textor, R.G. Richards. "Staphylococcus aureus Adhesion to Titanium Oxide Surfaces Coated with Non-Functionalized and Peptide-Functionalized Poly(L-Lysine)-grafted-Poly(Ethylene Glycol) Copolymers." Biomaterials (2004) 25: 4135-4148.
Li, Chenghao, Doru Constantin, Tim Salditt. "Biomimetic Membranes of Lipid–Peptide Model Systems Prepared on Solid Support." J. Phys.: Condens. Matter. (2004) 16: S2439-S2453.
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Wu, Min, David Holowka, Harold G. Craighead, Barbara Baird. "Visualization of Plasma Membrane Compartmentalization with Patterned Lipid Bilayers." Proc. Natl. Ac. Sci. (2004) 101(38): 13798-13803.
Faraasen, Sofia, János Vörös, Gábor Csúcs, Marcus Textor, Hans P. Merkle, Elke Walter. "Ligand-Specific Targeting of Microspheres to Phagocytes by Surface Modification with Poly(L-Lysine)-Grafted Poly(Ethylene Glycol) Conjugate.." Pharm. Res. (2003) 20(2): 237-246.
Forouhar, Farhad, Wei-Ning Huang, Jyung-Hurng Liu, Kun-Yi Chien, Wen-guey Wu, Chwan-Deng Hsiao. "Structural Basis of Membrane-Induced Cardiotoxin A3 Oligomerization." J. Biol. Chem. (2003) 278(24): 21980–21988.
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Serro, A.P., B. Saramago. "Influence of Sterilization on the Mineralization of Titanium Implants Induced Byincubation in Various Biological Model Fluids." Biomaterials (2003) 24: 4749-4760.
Thurner, Philipp, Bert Müller, Felix Beckmann, Timm Weitkamp, Christoph Rau, Ralph Müller, Jeffrey A. Hubbell, Urs Sennhauser. "Tomography Studies of Human Foreskin Fibroblasts on Polymer Yarns." Nucl. Instrum. Methods Phys. Res. B, (2003) 200: 397-405.
Zhao, Jiang, Lukas K. Tamm. "FTIR and Fluorescence Studies of Interactions of Synaptic Fusion Proteins in Polymer-Supported Bilayers.." Langmuir (2003) 19: 1838-1846.
Grant, L.M., F. Tiberg. "Normal and Lateral Forces Between Lipid Covered Solids in Solution: Correlation with Layer Packing and Structure." Biophys. J. (2002) 82: 1373-1385.
Huang, Ning-Ping, Gabor Csucs, Kazunori Emoto, Yukio Nagasaki, Kazunori Kataoka, Marcus Textor, Nicholas D. Spencer. "Covalent Attachment of Novel Poly(ethylene glycol)-Poly(DL-lactic acid) Copolymeric Micelles to TiO₂ Surfaces." Langmuir (2002) 18: 252-258.
Wang, Ning, Emanuele Ostuni, George M. Whitesides, Donald E. Ingber. "Micropatterning Tractional Forces in Living Cells." Cell Motility and the Cytoskeleton (2002) 52: 97-106.
Ajo-Franklin, Caroline M., Lance Kam, Steven G. Boxer. "High Refractive Index Substrates for Fluorescence Microscopy of Biological Interfaces with High Z Contrast." Proc. Natl. Ac. Sci. (2001) 98(24): 13643–13648.
Berg, I. Cecilia Hahn, Dries Muller, Thomas Arnebrant, Martin Malmsten. "Ellipsometry and TIRF Studies of Enzymatic Degradation of Interfacial Proteinaceous Layers." Langmuir (2001) 17: 1641-1652.
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Vander Stricht, Delphine, Vincent Raussens, Keith A. Oberg, Jean-Marie Ruysschaert, Erik Goormaghtigh. "Difference Between the E1 and E2 Conformations of Gastric H⁺/K⁺ -ATPase in a Multilamellar Lipid Film System: Characterization by Fluorescence and ATR-FTIR Spectroscopy Under a Continuous Buffer Flow." Eur. J. Biochem. (2001) 268: 2873-2880.
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Patents

Mutus, B., E.C.J. Carriveau, H. Kaur. "Method and apparatus to conduct kinetic analysis of platelet function in whole blood samples." Patent 20110086363A1. Apr. 14, 2011 (published).
Riveline, D., A. Buguin. "Devices and methods for observing the cell division." Patent EP Patent 2,219,027. Aug. 18, 2010 (published).
Hsing, I-M., S. W. S. Yeung, M. H. T. Lee. "Method and System for Real Time Quantification and Monitoring of Nucleic Acid Amplfication Using Electroconductive or Electrochemically Active Labels." Patent WO 2008022538. Feb. 28, 2008 (published).
Turner, S. and J. Korlach. "Arrays of optical confinements and uses thereof." Patent US 7315019 B2. Jan. 01, 2008 (published).
Zhang, Z., P. Boccazzi, H. Choi, K. F. Jensen, A. J. Sinskey. "Microbioreactor for continuous cell culture." Patent US 20060199260 A1. Sept. 07, 2006 (published).
Turner, S. and Korlach, J.. "Apparatus and method for performing nucleic acid analysis." Patent US 20060063264 A1. Mar. 26, 2006 (published).
Burling, Hans, Esben Skipper Sorensen, Hans Bertelsen, Anders Steen Jorgensen, Gitte Graverholt. "Use of Osteopontin in Dental Formulations." Patent US20050207996 A1. Sept. 22, 2005 (published).
Burling, Hans, Esben Skipper Sorensen, Hans Bertelsen, Anders Steen Jorgensen, Gitte Graverholt. "Use of Osteopontin in Dental Formulations." Patent WO2005053628 A1. June 16, 2005 (published).
Hovis, Jennifer S., Steven G. Boxer. "Lipid Bilayer Arrays and Methods of Making and Using Same." Patent WO0126800 A1. Apr. 20, 2005 (published).
Pawlak, M., G. L. Duveneck, N. P. Huang, S. M. De Paul, M. Textor, R. Hofer, E. Schurmann-Mader. "Bioanalytical Recognition Surface with Optimised Recognition Element Density." Patent US 20040253596 A1. Dec. 16, 2004 (published).
Chaikof, Elliot L., Kacey G. Marra, John H. Chon. "Modular Cytomimetic Biomaterials, Transport Studies, Preparation and Utilization Thereof." Patent US006699952 B2. Mar. 02, 2004 (granted).
Kam, Lance, Steven G. Boxer. "Lipid Bilayer Array Method and Devices." Patent US20020009807 A1. Jan. 24, 2004 (published).
Cremer, Paul S., Hanbin Mao, Tinglu Yang. "Method and Apparatus for Temperature Gradient Microfluidics." Patent US20040005720 A1. Jan. 08, 2004 (published).
Pishko, Michael V., Wong-Gun Koh, Alexander Revzin. "Drug Candidate Screening Systems Based on Micropatterned Hyrogels and Microfluidic Systems." Patent US20030175824 A1. Sept. 18, 2003 (published).

Dissertations

Marcos. "Bacteria in Shear Flow." Ph.D. diss., Massachusetts Institute of Technology, 2011.
Weder, G.. "Living cell adhesion measured by force spectroscopy." Ph.D. diss., University of Neuchâtel, Switzerland, 2010.
Svensson, O.. "Interactions of Mucins with Biopolymers and Drug Delivery Particles." Ph.D. diss., Malmo University, 2008.
Szilluweit, Ruth. "Strukturuntersuchungen von superspiralisierter DNA mit Hilfe des Rasterkraftmikroskops (Structure investigations of superspiralisierter DNA with the help of the raster force microscope)." Ph.D. diss., Johannes Gutenberg-Universität Mainz, 2005.
Serr, Andreas. "Interaction Forces of Poly(Styrenesulfonate)-Covered Surfaces Measured by Direct Force Spectroscopy." Ph.D. diss., Universität Bielefeld, 2003.
Biel, Simone. "Rekonstitution der gekoppelten Fumarat-Atmung von Wolinella succinogenes (Reconstitution of the coupled Fumarat respiration of Wolinella of succinogenes)." Ph.D. diss., Universität in Frankfurt am Main, 2002.
de Graaf, Ariël. "Deposition of CNH Materials: Plasma and Film Characterization." Ph.D. diss., Universiteitsdrukkerij Technische Universiteit Eindhoven, 2000.